BMC Bioinformatics

official impact factor 3.03

This article is part of the supplement: Proceedings of the BioNLP 08 ACL Workshop: Themes in biomedical language processing

Open Access Research

The BioScope corpus: biomedical texts annotated for uncertainty, negation and their scopes

Veronika Vincze1*, György Szarvas1*, Richárd Farkas2, György Móra1 and János Csirik2

Author Affiliations

1 University of Szeged, Department of Informatics, Human Language Technology Group, Árpád tér 2., Szeged, Hungary

2 Research Group on Artificial Intelligence of the Hungarian Academy of Sciences and University of Szeged, Aradi Vértanúk tere 1., Szeged, Hungary

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BMC Bioinformatics 2008, 9(Suppl 11):S9 doi:10.1186/1471-2105-9-S11-S9

Published: 19 November 2008

Additional files

Additional file 1:

Statistics of the top10 keyword candidates for each subcorpus. We present statistics (#annotated, #not annotated, keyword%, average scope size) for the 10 most common negation and speculative cue candidates for each subcorpus.

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