Translocation captured by a cluster of three chimeric read pairs. The first set of reads map to the forward strand of chromosome i, and the second set map to reverse strand of chromosome j. The distance between the outermost reads to the breakpoint are D1 and D2, for chromosomes i and j respectively. These distances must be less than or equal to mean + k*stdev.
Hayes and Li BMC Bioinformatics 2013 14(Suppl 5):S6 doi:10.1186/1471-2105-14-S5-S6