Articles
Volume 14 Supplement 5
Proceedings of the Third Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2013)
Proceedings
RECOMB-seq: Third Annual Recomb Satellite Workshop on Massively Parallel Sequencing
Beijing, China
11-12 April 2013
Edited by Haixu Tang, Tao Jiang and Xuegong Zhang
The supplement has not received any external sponsorship, full details can be found in the Declarations of each individual article.
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Discovering motifs that induce sequencing errors Manuel Allhoff, Alexander Schönhuth, Marcel Martin, Ivan G Costa, Sven Rahmann, Tobias Marschall BMC Bioinformatics 2013, 14(Suppl 5):S1 (10 April 2013) |
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Christina Ander, Ole B Schulz-Trieglaff, Jens Stoye, Anthony J Cox BMC Bioinformatics 2013, 14(Suppl 5):S2 (10 April 2013) |
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Joint genotype inference with germline and somatic mutations Eric Bareke, Virginie Saillour, Jean-François Spinella, Ramon Vidal, Jasmine Healy, Daniel Sinnett, Miklós Csűrös BMC Bioinformatics 2013, 14(Suppl 5):S3 (10 April 2013) |
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Discovering and mapping chromatin states using a tree hidden Markov model Jacob Biesinger, Yuanfeng Wang, Xiaohui Xie BMC Bioinformatics 2013, 14(Suppl 5):S4 (10 April 2013) |
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Jie Zhu, Yufang Qin, Taigang Liu, Jun Wang, Xiaoqi Zheng BMC Bioinformatics 2013, 14(Suppl 5):S5 (10 April 2013) |
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Matthew Hayes, Jing Li BMC Bioinformatics 2013, 14(Suppl 5):S6 (10 April 2013) |
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De Bruijn Superwalk with Multiplicities Problem is NP-hard Evgeny Kapun, Fedor Tsarev BMC Bioinformatics 2013, 14(Suppl 5):S7 (10 April 2013) |
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A random-permutations-based approach to fast read alignment Roy Lederman BMC Bioinformatics 2013, 14(Suppl 5):S8 (10 April 2013) |
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Assembling contigs in draft genomes using reversals and block-interchanges Chi-Long Li, Kun-Tze Chen, Chin Lung Lu BMC Bioinformatics 2013, 14(Suppl 5):S9 (10 April 2013) |
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An optimized algorithm for detecting and annotating regional differential methylation Sheng Li, Francine E Garrett-Bakelman, Altuna Akalin, Paul Zumbo, Ross Levine, Bik L To, Ian D Lewis, Anna L Brown, Richard J D'Andrea, Ari Melnick, Christopher E Mason BMC Bioinformatics 2013, 14(Suppl 5):S10 (10 April 2013) |
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A mixture model for expression deconvolution from RNA-seq in heterogeneous tissues Yi Li, Xiaohui Xie BMC Bioinformatics 2013, 14(Suppl 5):S11 (10 April 2013) |
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Gene prediction in metagenomic fragments based on the SVM algorithm Yongchu Liu, Jiangtao Guo, Gangqing Hu, Huaiqiu Zhu BMC Bioinformatics 2013, 14(Suppl 5):S12 (10 April 2013) |
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Evaluating genome architecture of a complex region via generalized bipartite matching Christine Lo, Sangwoo Kim, Shay Zakov, Vineet Bafna BMC Bioinformatics 2013, 14(Suppl 5):S13 (10 April 2013) |
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CLASS: constrained transcript assembly of RNA-seq reads Li Song, Liliana Florea BMC Bioinformatics 2013, 14(Suppl 5):S14 (10 April 2013) |
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A novel min-cost flow method for estimating transcript expression with RNA-Seq Alexandru I Tomescu, Anna Kuosmanen, Romeo Rizzi, Veli Mäkinen BMC Bioinformatics 2013, 14(Suppl 5):S15 (10 April 2013) |
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Gene set enrichment analysis of RNA-Seq data: integrating differential expression and splicing Xi Wang, Murray J Cairns BMC Bioinformatics 2013, 14(Suppl 5):S16 (10 April 2013) |
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De novo inference of stratification and local admixture in sequencing studies Yu Zhang BMC Bioinformatics 2013, 14(Suppl 5):S17 (10 April 2013) |
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Optimal assembly for high throughput shotgun sequencing Guy Bresler, Ma'ayan Bresler, David Tse BMC Bioinformatics 2013, 14(Suppl 5):S18 (9 July 2013) |
