Figure 3.

The breakpoint graph <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M187','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M187">View MathML</a> with possible edges to be added to the adjacencies of <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M1','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M1">View MathML</a>. Breakpoint graph <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M187','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M187">View MathML</a> consisting of paths and cycles. Thick edges are in <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M188','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M188">View MathML</a>, and thin edges are in <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M2','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M2">View MathML</a>. Dashed edges are the edges that should be added to <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M2','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M2">View MathML</a> for the paths whose first and last edges are in <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M188','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/S19/S9/mathml/M188">View MathML</a>.

Mahmoody et al. BMC Bioinformatics 2012 13(Suppl 19):S9   doi:10.1186/1471-2105-13-S19-S9