Simulations for a tree without WGD, and a maximum of rmax inversions (x-axis on the two left diagrams) on each branch. Red curves are the results of GapAdj and the blue ones those of InferCAR. From left to right, (1st): Error rate for the inferred ancestral genome; (2nd) Number of inferred CAR; (3d) Error rate and (4th) Number of CARs obtained by GapAdj . For these two diagrams rmax = 20 and values on the x-axis correspond to the parameter MAXα.
Gagnon et al. BMC Bioinformatics 2012 13(Suppl 19):S4 doi:10.1186/1471-2105-13-S19-S4