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This article is part of the supplement: Proceedings of the Tenth Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics

Open Access Proceedings

Gene family assignment-free comparative genomics

Daniel Doerr12*, Annelyse Thévenin12 and Jens Stoye12

Author Affiliations

1 Genome Informatics, Faculty of Technology, Center for Biotechnology (CeBiTec), Bielefeld University, Germany

2 Institute for Bioinformatics, Center for Biotechnology (CeBiTec), Bielefeld University, Germany

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BMC Bioinformatics 2012, 13(Suppl 19):S3  doi:10.1186/1471-2105-13-S19-S3

Published: 19 December 2012

Additional files

Additional file 1:

Measured adjacencies between 12 γ-proteobacterial genomes. Values obtained from FFAdj-Int and FFAdj-MCS. #adj denotes the number of conserved adjacencies in the matching and #edg indicates the number of its edges. X indicates that the exact calculation did not terminate due to the lack of sufficient memory.

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