Figure 2.

A connected component of the similarity graph. See Section Experiments on real datasets for a description of the data. Black edges are part of our cover while red edges highlight inferred inparalog relationships. Despite the low similarity between genes NP_956275.1 and NP_001037819.2, a clear signal for their inparalogy is present. The relationship is confirmed by gene annotations. InParanoid does not detect such inparalogy for the speciation between zebrafish and pufferfish.

Tremblay-Savard and Swenson BMC Bioinformatics 2012 13(Suppl 19):S16   doi:10.1186/1471-2105-13-S19-S16