The Compareads pipeline. Representation of the three steps while comparing symmetrically read sets A and B. In each set, reads are represented by horizontal lines. On each read one or two shared k-mers are represented by rectangles.
Maillet et al. BMC Bioinformatics 2012 13(Suppl 19):S10 doi:10.1186/1471-2105-13-S19-S10