Table 2

Stacking experiments on Genia

System

Simple

Binding

Regulation

Overall


UMass

74.7

47.7

42.8

54.8

Stanford (1N)

71.3

44.2

35.6

49.9

Stanford (1P)

70.7

42.6

34.6

49.1

Stanford (2N)

69.0

40.5

30.8

46.5

Stanford (2P)

72.0

40.3

35.4

49.5

Stanford (1N, reranked)

71.7

46.9

35.4

50.2

Stanford (1P, reranked)

70.6

44.5

35.5

49.4

Stanford (2N, reranked)

70.2

44.6

38.2

47.9

Stanford (2P, reranked)

71.1

47.8

35.9

50.5

Stanford (all, reranked)

71.6

48.1

35.9

50.7


UMass←Stanford (all) (= FAUST)

76.9

43.5

44.0

55.9

UMass←Stanford (1N)

76.4

45.1

43.8

55.6

UMass←Stanford (1P)

75.8

43.1

44.6

55.7

UMass←Stanford (2N)

74.9

42.8

43.8

54.9

UMass←Stanford (2P)

75.7

46.0

44.1

55.7


UMass←Stanford (all, anchors)

76.4

41.2

43.1

54.9

UMass←Stanford (all, arguments)

76.1

41.7

43.6

55.1


UMass←Stanford (all) without novel events

77.3

44.5

43.5

56.2


BioNLP F1 scores on the development section of the Genia track (task 1) for several event categories and overall F1. The best scores from each column are bolded.

McClosky et al. BMC Bioinformatics 2012 13(Suppl 11):S9   doi:10.1186/1471-2105-13-S11-S9

Open Data