Table 5

Results on the GENIA relation corpus

TEES

GETM


Relation type

Prec.

Rec.

F

Prec.

Rec.

F


Equivalence (E)

93.13

95.31

94.21

97.64

96.12

96.88

Protein-Component (E)

96.08

96.08

96.08

100.00

86.27

92.63

Subunit-Complex (E)

79.17

86.36

82.61

80.00

72.73

76.19

All (E)

92.23

94.53

93.37

97.85

90.10

93.81


Member-Collection (NE)

81.44

75.14

78.16

71.73

75.69

73.66

Protein-Component (NE)

87.77

67.03

76.01

73.33

83.63

78.14

Subunit-Complex (NE)

81.54

64.63

72.11

73.24

63.41

67.97

All (NE)

83.83

69.89

76.23

72.65

76.50

74.52


ALL (E+NE)

86.83

77.55

81.93

79.94

80.82

80.38


Performance on the GENIA relation corpus for embedded (E) and non-embedded (NE) relation types, measured by precision, recall and their harmonic mean, the F-score.

Van Landeghem et al. BMC Bioinformatics 2012 13(Suppl 11):S6   doi:10.1186/1471-2105-13-S11-S6

Open Data