Table 3

Detailed results on the test data using SEARN with domain adaptation

Domain

abstracts+full

abstracts

full papers


Event Type/Class

Recall

Precision

F-score

F-score

F-score


Gene_expression

69.46

80.65

74.64

72.63

79.35

Transcription

44.83

62.40

52.17

53.11

48.28

Protein_catabolism

73.33

42.31

53.66

70.97

0.00

Phosphorylation

81.62

88.82

85.07

83.08

90.53

Localization

45.03

88.66

59.72

61.72

43.75


Simple (TOTAL)

65.22

79.78

71.77

70.32

75.80


Binding

38.09

57.36

45.78

46.67

43.72


Simple+Binding (TOTAL)

58.75

75.23

65.98

65.27

67.87


Regulation

32.99

41.50

36.76

38.13

32.77

Positive_regulation

40.82

51.62

45.59

44.69

47.36

Negative_regulation

38.35

43.89

40.93

43.80

35.64


Regulation (TOTAL)

38.97

48.05

43.04

43.33

42.45


TOTAL

48.10

60.34

53.53

53.79

52.93


Vlachos and Craven BMC Bioinformatics 2012 13(Suppl 11):S5   doi:10.1186/1471-2105-13-S11-S5

Open Data