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This article is part of the supplement: Proceedings of the 11th Annual Bioinformatics Open Source Conference (BOSC) 2010

Open Access Proceedings

ONTO-ToolKit: enabling bio-ontology engineering via Galaxy

Erick Antezana1*, Aravind Venkatesan1, Chris Mungall2, Vladimir Mironov1 and Martin Kuiper1

Author Affiliations

1 Department of Biology, Norwegian University of Science and Technology (NTNU), Høgskoleringen 5, N-7491 Trondheim, Norway

2 Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA

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BMC Bioinformatics 2010, 11(Suppl 12):S8  doi:10.1186/1471-2105-11-S12-S8

Published: 21 December 2010

Additional files

Additional file 1:

This file contains all the additional results referred to in the description of the use cases I and II.

    Subsection I:
Use case I - Lists the ancestor terms for CCO:F0000391.

    Subsection II:
Use case I - Lists the ancestor terms for CCO:F0000759.

    Subsection III:
Use case I - Lists the overlapping terms generates as part of step 2.

    Subsection IV:
Use Case II - GO terms associated with JUN (Uniprot ID: P05412)

    Subsection V:
Use Case II - GO terms associated with FOS (Uniprot ID: P01100)

    Subsection VI:
Use Case II - Intersection of GO terms associated JUN and FOS

Format: PDF Size: 27KB Download file

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Open Data