Articles
Volume 11 Supplement 12
Proceedings of the 11th Annual Bioinformatics Open Source Conference (BOSC) 2010
Proceedings
The 11th Annual Bioinformatics Open Source Conference (BOSC) 2010
Boston, MA, USA
9-10 July 2010
Edited by Kam D Dahlquist
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An overview of the Hadoop/MapReduce/HBase framework and its current applications in bioinformatics Ronald C Taylor BMC Bioinformatics 2010, 11(Suppl 12):S1 (21 December 2010) |
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SeqWare Query Engine: storing and searching sequence data in the cloud Brian D O’Connor, Barry Merriman, Stanley F Nelson BMC Bioinformatics 2010, 11(Suppl 12):S2 (21 December 2010) |
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Hybrid cloud and cluster computing paradigms for life science applications Judy Qiu, Jaliya Ekanayake, Thilina Gunarathne, Jong Choi, Seung-Hee Bae, Hui Li, Bingjing Zhang, Tak-Lon Wu, Yang Ruan, Saliya Ekanayake, Adam Hughes, Geoffrey Fox BMC Bioinformatics 2010, 11(Suppl 12):S3 (21 December 2010) |
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Galaxy CloudMan: delivering cloud compute clusters Enis Afgan, Dannon Baker, Nate Coraor, Brad Chapman, Anton Nekrutenko, James Taylor BMC Bioinformatics 2010, 11(Suppl 12):S4 (21 December 2010) |
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Community-driven computational biology with Debian Linux Steffen Möller, Hajo Krabbenhöft, Andreas Tille, David Paleino, Alan Williams, Katy Wolstencroft, Carole Goble, Richard Holland, Dominique Belhachemi, Charles Plessy BMC Bioinformatics 2010, 11(Suppl 12):S5 (21 December 2010) |
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Jens Lichtenberg, Kyle Kurz, Xiaoyu Liang, Rami Al-ouran, Lev Neiman, Lee J Nau, Joshua D Welch, Edwin Jacox, Thomas Bitterman, Klaus Ecker, Laura Elnitski, Frank Drews, Stephen Lee, Lonnie R Welch BMC Bioinformatics 2010, 11(Suppl 12):S6 (21 December 2010) |
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SADI, SHARE, and the Mark D Wilkinson, Luke McCarthy, Benjamin Vandervalk, David Withers, Edward Kawas, Soroush Samadian BMC Bioinformatics 2010, 11(Suppl 12):S7 (21 December 2010) |
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ONTO-ToolKit: enabling bio-ontology engineering via Galaxy Erick Antezana, Aravind Venkatesan, Chris Mungall, Vladimir Mironov, Martin Kuiper BMC Bioinformatics 2010, 11(Suppl 12):S8 (21 December 2010) |
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The Musite open-source framework for phosphorylation-site prediction Jianjiong Gao, Dong Xu BMC Bioinformatics 2010, 11(Suppl 12):S9 (21 December 2010) |
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interPopula: a Python API to access the HapMap Project dataset Tiago Antao BMC Bioinformatics 2010, 11(Suppl 12):S10 (21 December 2010) |
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Laurent Gautier BMC Bioinformatics 2010, 11(Suppl 12):S11 (21 December 2010) |
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The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button Morris A Swertz, Martijn Dijkstra, Tomasz Adamusiak, Joeri K van der Velde, Alexandros Kanterakis, Erik T Roos, Joris Lops, Gudmundur A Thorisson, Danny Arends, George Byelas, Juha Muilu, Anthony J Brookes, Engbert O de Brock, Ritsert C Jansen, Helen Parkinson BMC Bioinformatics 2010, 11(Suppl 12):S12 (21 December 2010) |
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IPRStats: visualization of the functional potential of an InterProScan run Ryan J Kelly, David E Vincent, Iddo Friedberg BMC Bioinformatics 2010, 11(Suppl 12):S13 (21 December 2010) |

