Table 5

Reactions of the Buchnera metabolic network that involve protons.

MixNet class 7

substrate(s)

product(s)


proton+cpd-602

cpd-1086

proton+super-oxide

hydrogen-peroxide+oxygen-molecule

proton+hydroxy-methyl-butenyl-dip

delta(3)-isopentenyl-pp

proton+hydroxy-methyl-butenyl-dip

cpd-4211

proton+3-dehydro-shikimate

shikimate

proton+2,3-dihydrodipicolinate

delta1-piperideine-2-6-dicarboxylate

proton+2-amino-3-oxo-4-phosphonooxybutyrate

1-amino-propan-2-one-3-phosphate+carbon-dioxide

proton+2-aceto-lactate

dioh-isovalerate

proton+methylene-thf

5-methyl-thf

proton+l-aspartate-semialdehyde

homo-ser


MixNet class 10

substrate(s)

product(s)


erythrose-4p

proton+erythronate-4p

2-d-threo-hydroxy-3-carboxy-isocaproate

proton+cpd-7100

cpd-296

proton+lipoic-acid

proton+oxygen-molecule

proton

sirohydrochlorin+fe+2

proton+siroheme

glc-6-p

proton+d-6-p-glucono-delta-lactone


Picard et al. BMC Bioinformatics 2009 10(Suppl 6):S17   doi:10.1186/1471-2105-10-S6-S17

Open Data