Supplements
Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Tim Sands PhD
BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 10 Suppl 6
European Molecular Biology Network (EMBnet) Conference 2008: 20th Anniversary Celebration. Leading applications and technologies in bioinformatics
Proceedings
from European Molecular Biology Network (EMBnet) Conference 2008: 20th Anniversary Celebration
Martina Franca, Italy. 18
20 September 2008
Edited by Erik Bongcam-Rudloff, Domenica D'Elia, Andreas Gisel, Sophia Kossida, Kimmo Mattila and Lubos Klucar
Introduction
The 20th anniversary of EMBnet: 20 years of bioinformatics for the Life Sciences Domenica D'Elia, Andreas Gisel, Nils-Einar Eriksson, Sophia Kossida, Kimmo Mattila, Lubos Klucar, Erik Bongcam-Rudloff BMC Bioinformatics 2009, 10 (Suppl 6):S1 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Statistical assessment of discriminative features for protein-coding and non coding cross-species conserved sequence elements Teresa M Creanza, David S Horner, Annarita D'Addabbo, Rosalia Maglietta, Flavio Mignone, Nicola Ancona, Graziano Pesole BMC Bioinformatics 2009, 10 (Suppl 6):S2 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Databases of homologous gene families for comparative genomics Simon Penel, Anne-Muriel Arigon, Jean-Fran BMC Bioinformatics 2009, 10 (Suppl 6):S3 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
RetroTector online, a rational tool for analysis of retroviral elements in small and medium size vertebrate genomic sequences G BMC Bioinformatics 2009, 10 (Suppl 6):S4 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
RegExpBlasting (REB), a Regular Expression Blasting algorithm based on multiply aligned sequences Francesco Rubino, Marcella Attimonelli BMC Bioinformatics 2009, 10 (Suppl 6):S5 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
DoOPSearch: a web-based tool for finding and analysing common conserved motifs in the promoter regions of different chordate and plant genes Endre Sebesty BMC Bioinformatics 2009, 10 (Suppl 6):S6 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
The Mycoplasma conjunctivae genome sequencing, annotation and analysis Sandra P Calderon-Copete, George Wigger, Christof Wunderlin, Tobias Schmidheini, Joachim Frey, Michael A Quail, Laurent Falquet BMC Bioinformatics 2009, 10 (Suppl 6):S7 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Expression pattern divergence of duplicated genes in rice Zhe Li, He Zhang, Song Ge, Xiaocheng Gu, Ge Gao, Jingchu Luo BMC Bioinformatics 2009, 10 (Suppl 6):S8 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Functional assessment of time course microarray data Mar BMC Bioinformatics 2009, 10 (Suppl 6):S9 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
EasyCluster: a fast and efficient gene-oriented clustering tool for large-scale transcriptome data Ernesto Picardi, Flavio Mignone, Graziano Pesole BMC Bioinformatics 2009, 10 (Suppl 6):S10 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
GIBA: a clustering tool for detecting protein complexes Charalampos N Moschopoulos, Georgios A Pavlopoulos, Reinhard Schneider, Spiridon D Likothanassis, Sophia Kossida BMC Bioinformatics 2009, 10 (Suppl 6):S11 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
'Brukin2D': a 2D visualization and comparison tool for LC-MS data Dimosthenis Tsagkrasoulis, Panagiotis Zerefos, George Loudos, Antonia Vlahou, Marc Baumann, Sophia Kossida BMC Bioinformatics 2009, 10 (Suppl 6):S12 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
A chemogenomics view on protein-ligand spaces Helena Str BMC Bioinformatics 2009, 10 (Suppl 6):S13 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
iBarcode.org: web-based molecular biodiversity analysis Gregory AC Singer, Mehrdad Hajibabaei BMC Bioinformatics 2009, 10 (Suppl 6):S14 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Towards barcode markers in Fungi: an intron map of Ascomycota mitochondria Monica Santamaria, Saverio Vicario, Graziano Pappad BMC Bioinformatics 2009, 10 (Suppl 6):S15 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Modeling heterocyst pattern formation in cyanobacteria Ziomara P Gerdtzen, J Cristian Salgado, Axel Osses, Juan A Asenjo, Ivan Rapaport, Barbara A Andrews BMC Bioinformatics 2009, 10 (Suppl 6):S16 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Deciphering the connectivity structure of biological networks using MixNet Franck Picard, Vincent Miele, Jean-Jacques Daudin, Ludovic Cottret, St BMC Bioinformatics 2009, 10 (Suppl 6):S17 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Annotation and visualization of endogenous retroviral sequences using the Distributed Annotation System (DAS) and eBioX BMC Bioinformatics 2009, 10 (Suppl 6):S18 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Visualising biological data: a semantic approach to tool and database integration Steve Pettifer, David Thorne, Philip McDermott, James Marsh, Alice Vill BMC Bioinformatics 2009, 10 (Suppl 6):S19 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Proceedings
Human microRNA target analysis and gene ontology clustering by GOmir, a novel stand-alone application Maria G Roubelakis, Pantelis Zotos, Georgios Papachristoudis, Ioannis Michalopoulos, Kalliopi I Pappa, Nicholas P Anagnou, Sophia Kossida BMC Bioinformatics 2009, 10 (Suppl 6):S20 (16 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
BMC Bioinformatics Volumes
20 September 2008
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ran Sperber, Anders L
n, Tibor Nagy, S
ndor Suhai, Endre Barta
a Jos
, Gaetano Scioscia, Claudio Scazzocchio, Cecilia Saccone
lvaro Mart