This article is part of the supplement: Proceedings of the Sixth Annual MCBIOS Conference. Transformational Bioinformatics: Delivering Value from Genomes
Proceedings
Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom
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* Corresponding author: Joshua S Yuan syuan@tamu.edu
- † Equal contributors
1 Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, USA
2 Institute for Plant Genomics and Biotechnology, Texas A&M University, College Station, TX, USA
3 Department of Plant Sciences, University of Tennessee, Knoxville, TN, USA
4 National Renewable Energy Laboratory, Golden, CO, USA
5 Oak Ridge National Laboratory, Oak Ridge, TN, USA
6 Department of Biosystems Engineering and Soil Sciences, University of Tennessee, Knoxville, TN, USA
BMC Bioinformatics 2009, 10(Suppl 11):S3 doi:10.1186/1471-2105-10-S11-S3
Published: 8 October 2009Additional files
Additional file 1:
Phylogenetic analysis C4H genes across different species. The naming of the genes follows the schema in Figure 2 to 4. The analysis indicated that C4H genes from lower plants share a clade, while there is no distinction between monocot and dicot species.
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Additional file 2:
Phylogenetic analysis of COMT gene family. The analysis reviews three major groups as lower plants, monocot and dicot. Most of the COMT genes followed the group classification in the phylogenetic analysis.
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Additional file 3:
Phylogenetic analysis of CCR gene family. The analysis revealed three major clades for each group of plants as monocot, dicot, and lower plants.
Format: PDF Size: 70KB Download file
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