Supplements
Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Tim Sands PhD
BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 10 Suppl 11
Proceedings of the Sixth Annual MCBIOS Conference. Transformational Bioinformatics: Delivering Value from Genomes
Proceedings
from Sixth Annual MCBIOS Conference. Transformational Bioinformatics: Delivering Value from Genomes
Starkville, MS, USA. 20
21 February 2009
Edited by Jonathan D Wren (Senior Editor), Yuriy Gusev, Raphael D Isokpehi, Dan Berleant, Ulisses Braga-Neto, Dawn Wilkins and Susan Bridges
Introduction
Proceedings of the 2009 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference Jonathan D Wren, Yuriy Gusev, Raphael D Isokpehi, Daniel Berleant, Ulisses Braga-Neto, Dawn Wilkins, Susan Bridges BMC Bioinformatics 2009, 10 (Suppl 11):S1 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Facilitating functional annotation of chicken microarray data Teresia J Buza, Ranjit Kumar, Cathy R Gresham, Shane C Burgess, Fiona M McCarthy BMC Bioinformatics 2009, 10 (Suppl 11):S2 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom Zhanyou Xu, Dandan Zhang, Jun Hu, Xin Zhou, Xia Ye, Kristen L Reichel, Nathan R Stewart, Ryan D Syrenne, Xiaohan Yang, Peng Gao, Weibing Shi, Crissa Doeppke, Robert W Sykes, Jason N Burris, Joseph J Bozell, (Max) Zong-Ming Cheng, Douglas G Hayes, Nicole Labbe, Mark Davis, C Neal Stewart Jr, Joshua S Yuan BMC Bioinformatics 2009, 10 (Suppl 11):S3 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Threshold selection in gene co-expression networks using spectral graph theory techniques Andy D Perkins, Michael A Langston BMC Bioinformatics 2009, 10 (Suppl 11):S4 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
HPD: an online integrated human pathway database enabling systems biology studies Sudhir R Chowbina, Xiaogang Wu, Fan Zhang, Peter M Li, Ragini Pandey, Harini N Kasamsetty, Jake Y Chen BMC Bioinformatics 2009, 10 (Suppl 11):S5 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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Computational analysis of gene expression space associated with metastatic cancer Andrey Ptitsyn BMC Bioinformatics 2009, 10 (Suppl 11):S6 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Exploratory visual analysis of conserved domains on multiple sequence alignments TJ Jankun-Kelly, Andrew D Lindeman, Susan M Bridges BMC Bioinformatics 2009, 10 (Suppl 11):S7 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Structural and functional-annotation of an equine whole genome oligoarray Lauren A Bright, Shane C Burgess, Bhanu Chowdhary, Cyprianna E Swiderski, Fiona M McCarthy BMC Bioinformatics 2009, 10 (Suppl 11):S8 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data Bart HJ van den Berg, Chamali Thanthiriwatte, Prashanti Manda, Susan M Bridges BMC Bioinformatics 2009, 10 (Suppl 11):S9 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Analysis and modeling of time-course gene-expression profiles from nanomaterial-exposed primary human epidermal keratinocytes Amin Zollanvari, Mary Jane Cunningham, Ulisses Braga-Neto, Edward R Dougherty BMC Bioinformatics 2009, 10 (Suppl 11):S10 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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Site-specific impacts on gene expression and behavior in fathead minnows (Pimephales promelas ) exposed in situ to streams adjacent to sewage treatment plants Nat BMC Bioinformatics 2009, 10 (Suppl 11):S11 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Microarray platform consistency is revealed by biologically functional analysis of gene expression profiles Zhiguang Li, Zhenqiang Su, Zhining Wen, Leming Shi, Tao Chen BMC Bioinformatics 2009, 10 (Suppl 11):S12 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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Automatic identification of angiogenesis in double stained images of liver tissue Mutlu Mete, Leah Hennings, Horace J Spencer, Umit Topaloglu BMC Bioinformatics 2009, 10 (Suppl 11):S13 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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NATbox: a network analysis toolbox in R Shweta S Chavan, Michael A Bauer, Marco Scutari, Radhakrishnan Nagarajan BMC Bioinformatics 2009, 10 (Suppl 11):S14 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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Protein local 3D structure prediction by Super Granule Support Vector Machines (Super GSVM) Bernard Chen, Matthew Johnson BMC Bioinformatics 2009, 10 (Suppl 11):S15 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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Novel software package for cross-platform transcriptome analysis (CPTRA) Xin Zhou, Zhen Su, R Douglas Sammons, Yanhui Peng, Patrick J Tranel, C Neal Stewart Jr, Joshua S Yuan BMC Bioinformatics 2009, 10 (Suppl 11):S16 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [1 comment ]
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An automated proteomic data analysis workflow for mass spectrometry Ken Pendarvis, Ranjit Kumar, Shane C Burgess, Bindu Nanduri BMC Bioinformatics 2009, 10 (Suppl 11):S17 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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PathBinder Lifeng Zhang, Daniel Berleant, Jing Ding, Tuan Cao, Eve Syrkin Wurtele BMC Bioinformatics 2009, 10 (Suppl 11):S18 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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Graph ranking for exploratory gene data analysis Cuilan Gao, Xin Dang, Yixin Chen, Dawn Wilkins BMC Bioinformatics 2009, 10 (Suppl 11):S19 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Integrating phenotype and gene expression data for predicting gene function Brandon M Malone, Andy D Perkins, Susan M Bridges BMC Bioinformatics 2009, 10 (Suppl 11):S20 (8 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
BMC Bioinformatics Volumes
21 February 2009
lia Garcia-Reyero, Ira R Adelman, Dalma Martinovi
, Li Liu, Nancy D Denslow