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Held in Uppsala, Sweden on 15-16 May 2008

BMC Research highlights

source flickr cc blmurch
BMC Bioinformatics 2009, 10:211
The puma software suite is a freely available, unified Bioconducter package for propagating uncertainty in microarray analysis, giving improved performance compared to more traditional methods of differential expression detection, principal component analysis and clustering.

Genome Biology 2009, 10:R73
A map of transcription start sites across the Drosophila genome, providing insights into initiation patterns and spatiotemporal conditions.

Genome Biology 2009, 10:R72
An integrative strategy of comparative genomics, experimental and computational approaches reveals aspects of a regulatory network controlling neuronal-specific expression in presynaptic neurons.

Ablestock
BMC Genomics 2009, 10:290
A transcriptome analysis of the Scorpiops jendeki venom gland has highlighted a number of venom peptides which may help drug development and aid our understanding of how the scorpion evolved its venom arsenal.

Genome Biology 2009, 10:R71
The first genetic linkage map of Schistosoma mansoni reveals insights into higher female recombination, confirms ZW inheritance patterns and recombination hotspots.

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BMC Latest research articles

Methodology article
Error statistics of hidden Markov model and hidden Boltzmann model results
Lee A Newberg
BMC Bioinformatics 2009, 10:212 (9July2009)
[Abstract] [Provisional PDF]

Software
puma: a Bioconductor package for Propagating Uncertainty in Microarray Analysis
Richard D Pearson, Xuejun Liu, Guido Sanguinetti, Marta Milo, Neil D Lawrence, Magnus Rattray
BMC Bioinformatics 2009, 10:211 (9July2009)
[Abstract] [Provisional PDF]

Research
Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome
Elizabeth A Rach, Hsiang-Yu Yuan, William H Majoros, Pavel Tomancak, Uwe Ohler
Genome Biology 2009, 10:R73 (9July2009)
[Abstract] [Provisional PDF]

Research article
Iterative refinement of structure-based sequence alignments by Seed Extension
Changhoon Kim, Chin-Hsien Tai, Byungkook Lee
BMC Bioinformatics 2009, 10:210 (9July2009)
[Abstract] [Provisional PDF]

Research article
Coordinated patterns of gene expression for adult muscle build-up in transgenic mice expressing myostatin propeptide
Baoping Zhao, Eileena J Li, Robert J Wall, Jinzeng Yang
BMC Genomics 2009, 10:305 (8July2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

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