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BMC Just published

Based on presentations at a workshop held in Santa Barbara, on 7-8 September 2006, this supplement is a collection of research articles related to novel algorithms and enabling techniques for bio- and biomedical image analysis, mining, visualisation, and biology applications

BMC Research highlights

Genome Biology 2008, 9:R77
A 10X draft sequence of Podospora anserina genome shows highly dynamic evolution since its divergence from Neurospora crassa.

Genome Biology 2008, 9:R76
The evolutionary distance between human and macaque is particularly attractive for investigating neutral substitution rates, which were calculated as a function of a number of genomic parameters.

BMC Medicine 2008, 6:11
Increased stromal collagen density in mouse mammary tissue increases both tumor formation and tumor cell invasive and migratory properties by three fold; furthermore, a metabolic signature for flavin adenine dinucleotide is identified in invading metastatic cells.

Genome Biology 2008, 9:R75
Comparative genome hybridization in 38 widely used laboratory strains of the social amoeba Dictyostelium discoideum detects previously unreported duplications and deletions in the Dictyostelium genome and highlights genetic variability between strains.

Credit: Matt Hodgkinson
BMC Bioinformatics 2008, 9:205
PubMed abstracts can now be effectively screened for articles related to human genetic association studies and genome epidemiology using GAPscreener, a free java-based tool.


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BMC What we are reading

Dr Alvis Brazma
Bioinformatics.org
Flags and Lollipops
Freelancing Science
Hublog
Journalology
NodalPoint.org
Notes from the BioMass
Postgenomic
Suicyte Notes


 Journals
Algorithms for Molecular Biology
BioData Mining
Biology Direct
BMC Bioinformatics
BMC Evolutionary Biology
BMC Genomics
BMC Medical Genomics
BMC Medical Informatics and Decision Making
Genome Biology
Immunome Research
Journal of Biology
Proteome Science
Source Code for Biology and Medicine
Theoretical Biology and Medical Modelling

BMC Featured video interview

Dr Jonathan Steven Alexander

BMC Latest research articles

Research article
Genomic and bioinformatics analysis of human adenovirus type 37: New insights into corneal tropism
Christopher M Robinson, Fatemeh Shariati, Allison F Gillaspy, David W Dyer, James Chodosh
BMC Genomics 2008, 9:213 (9May2008)
[Abstract] [Provisional PDF]

Software
Triad pattern algorithm for predicting strong promoter candidates in bacterial genomes
Michael Dekhtyar, Amelie Morin, Vehary Sakanyan
BMC Bioinformatics 2008, 9:233 (9May2008)
[Abstract] [Provisional PDF]

Research article
Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites
Jill L Wegrzyn, Thomas M Drudge, Faramarz Valafar, Vivian Hook
BMC Bioinformatics 2008, 9:232 (8May2008)
[Abstract] [Provisional PDF]

Software
Automating dChip: toward reproducible sharing of microarray data analysis
Cheng Li
BMC Bioinformatics 2008, 9:231 (8May2008)
[Abstract] [Provisional PDF]

Research article
Loss of p24 function in Drosophila melanogaster causes a stress response and increased levels of NF-kappaB-regulated gene products
Kara A Boltz, Ginger E Carney
BMC Genomics 2008, 9:212 (8May2008)
[Abstract] [Provisional PDF]

Research article
Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES 293 (West Pacific) strains
Rose Ann Cattolico, Michael A. Jacobs, Yang Zhou, Jean Chang, Melinda Duplessis, Terry Lybrand, John McKay, Han Chuan Ong, Elizabeth Sims, Gabrielle Rocap
BMC Genomics 2008, 9:211 (8May2008)
[Abstract] [Provisional PDF]






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