Articles
Volume 2 (2008) - July 2008
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Research article
Structural similarity of genetically interacting proteins Oranit Dror, Dina Schneidman-Duhovny, Alexandra Shulman-Peleg, Ruth Nussinov, Haim J Wolfson, Roded Sharan BMC Systems Biology 2008, 2:69 (31 July 2008) |
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Methodology article
Modeling cellular deformations using the level set formalism Liu Yang, Janet C Effler, Brett L Kutscher, Sarah E Sullivan, Douglas N Robinson, Pablo A Iglesias BMC Systems Biology 2008, 2:68 (24 July 2008) |
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Methodology article
Machine learning based analyses on metabolic networks supports high-throughput knockout screens Kitiporn Plaimas, Jan-Phillip Mallm, Marcus Oswald, Fabian Svara, Victor Sourjik, Roland Eils, Rainer König BMC Systems Biology 2008, 2:67 (24 July 2008) |
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Software
GridCell: a stochastic particle-based biological system simulator Laurier Boulianne, Sevin Al Assaad, Michel Dumontier, Warren J Gross BMC Systems Biology 2008, 2:66 (23 July 2008) |
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Research article
Incorporation of enzyme concentrations into FBA and identification of optimal metabolic pathways Rajat K De, Mouli Das, Subhasis Mukhopadhyay BMC Systems Biology 2008, 2:65 (18 July 2008) |
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Methodology article
Zuyi Huang, Fatih Senocak, Arul Jayaraman, Juergen Hahn BMC Systems Biology 2008, 2:64 (17 July 2008) |
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Methodology article
Multiway modeling and analysis in stem cell systems biology Bülent Yener, Evrim Acar, Pheadra Aguis, Kristin Bennett, Scott L Vandenberg, George E Plopper BMC Systems Biology 2008, 2:63 (14 July 2008) |
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Research article
A systems approach to model natural variation in reactive properties of bacterial ribosomes Julius H Jackson, Thomas M Schmidt, Patricia A Herring BMC Systems Biology 2008, 2:62 (13 July 2008) |
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Methodology article
Exhaustive identification of steady state cycles in large stoichiometric networks Jeremiah Wright, Andreas Wagner BMC Systems Biology 2008, 2:61 (11 July 2008) |
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Research article
Oxygen dependence of metabolic fluxes and energy generation of Paula Jouhten, Eija Rintala, Anne Huuskonen, Anu Tamminen, Mervi Toivari, Marilyn Wiebe, Laura Ruohonen, Merja Penttilä, Hannu Maaheimo BMC Systems Biology 2008, 2:60 (9 July 2008) |
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Research article
Metabolic modelling of polyhydroxyalkanoate copolymers production by mixed microbial cultures João ML Dias, Adrian Oehmen, Luísa S Serafim, Paulo C Lemos, Maria AM Reis, Rui Oliveira BMC Systems Biology 2008, 2:59 (8 July 2008) |
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Commentary
Short time-series microarray analysis: Methods and challenges Xuewei Wang, Ming Wu, Zheng Li, Christina Chan BMC Systems Biology 2008, 2:58 (7 July 2008) |
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Research article
Seeded Bayesian Networks: Constructing genetic networks from microarray data Amira Djebbari, John Quackenbush BMC Systems Biology 2008, 2:57 (4 July 2008) |
