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BMC Structural Biology

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Editor-in-Chief
Melissa Norton, MD

Biology Editor
Penelope Webb, PhD

In-house Editor
Matthew Kaiser PhD


Welcome to BMC Structural Biology published by BioMed Central
BMC Structural Biology is an open access journal publishing original peer-reviewed research articles in investigations into the structure of biological macromolecules, including solving structures, structural and functional analyses, and computational modeling. BMC Structural Biology (ISSN 1472-6807) is indexed/tracked/covered by PubMed, MEDLINE, BIOSIS, CAS, Scopus, EMBASE, Thomson Reuters (ISI) and Google Scholar.



BMC  Featured articles   

BMC Structural Biology 2009, 9:62
Comparing electron-ion interaction potentials of amino acids in pandemic H1N1 hemagglutinin against those of non-pandemic H1N1/N2 reveals four mutations that seem critical for increased interaction with human proteins, and three sites where mutations will probably increase human infectivity.


BMC  Latest articles published in BMC Structural Biology        [more info]


Software
Interacting with the biomolecular solvent accessible surface via a haptic feedback device
Matthew B Stocks, Steven Hayward, Stephen D Laycock
BMC Structural Biology 2009, 9:69 (27October2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

Research article
Partially-supervised protein subclass discovery with simultaneous annotation of functional residues
Benjamin Georgi, Jorg Schultz, Alexander Schliep
BMC Structural Biology 2009, 9:68 (26October2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

Research article
Structural insights into the substrate tunnel of Saccharomyces cerevisiae carbonic anhydrase Nce103
Yan-Bin Teng, Yong-Liang Jiang, Yong-xing He, Wei-Wei He, Fu-Ming Lian, Yuxing Chen, Cong-Zhao Zhou
BMC Structural Biology 2009, 9:67 (24October2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

Research article
Machine learning integration for predicting the effect of single amino acid substitutions on protein stability
Aysegul Ozen, Mehmet Gonen, Ethem Alpaydin, Turkan Haliloglu
BMC Structural Biology 2009, 9:66 (19October2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

Research article
Conformational changes and loose packing promote E. coli Tryptophanase cold lability
Anna Kogan, Garik Y Gdalevsky, Rivka Cohen-Luria, Yehuda Goldgur, Robert S Phillips, Abraham H Parola, Orna Almog
BMC Structural Biology 2009, 9:65 (8October2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Molecular models for intrastrand DNA G-quadruplexes
Federico Fogolari, Haritha Haridas, Alessandra Corazza, Paolo Viglino, Davide Cor, Michele Caselle, Gennaro Esposito, Luigi E Xodo
BMC Structural Biology 2009, 9:64 (7October2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Structural and functional characteristics of xenavidin, the first frog avidin from Xenopus tropicalis
Juha AE Mtt, Satu H Helppolainen, Vesa P Hytnen, Mark S Johnson, Markku S Kulomaa, Tomi T Airenne, Henri R Nordlund
BMC Structural Biology 2009, 9:63 (29September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Identification of hemagglutinin structural domain and polymorphisms which may modulate swine H1N1 interactions with human receptor
Veljko Veljkovic, Henry L Niman, Sanja Glisic, Nevena Veljkovic, Vladimir Perovic, Claude P Muller
BMC Structural Biology 2009, 9:62 (28September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [1 comment]

Research article
Mirrors in the PDB: left-handed -turns guide design with D-amino acids
Srinivas Annavarapu, Vikas Nanda
BMC Structural Biology 2009, 9:61 (22September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Exploring protein structural dissimilarity to facilitate structure classification
Pooja Jain, Jonathan D Hirst
BMC Structural Biology 2009, 9:60 (19September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]


BMC  Latest relevant articles from other journals in BioMed Central


Research article
RNA folding on the 3D triangular lattice
Joel Gillespie, Martin Mayne, Minghui Jiang
BMC Bioinformatics 2009, 10:369 (5November2009)
[Abstract] [Provisional PDF]

Methodology article
(PS)2-v2: template-based protein structure prediction server
Chih-Chieh Chen, Jenn-Kang Hwang, Jinn-Moon Yang
BMC Bioinformatics 2009, 10:366 (31October2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

Research article
Prediction of hot spot residues at protein-protein interfaces by combining machine learning and energy-based methods
Stefano Lise, Cedric Archambeau, Massimiliano Pontil, David T Jones
BMC Bioinformatics 2009, 10:365 (30October2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

Research
Characterization of the amyloid bacterial inclusion bodies of the HET-s fungal prion
Raimon Sabate, Alba Espargaro, Sven J Saupe, Salvador Ventura
Microbial Cell Factories 2009, 8:56 (28October2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

Research article
A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat
Yong Q Gu, Yaqin Ma, Naxin Huo, John P Vogel, Frank M You, Gerard R Lazo, William M Nelson, Carol Soderlund, Jan Dvorak, Olin D Anderson, Ming-Cheng Luo
BMC Genomics 2009, 10:496 (27October2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
A structure filter for the Eukaryotic Linear Motif Resource
Allegra Via, Cathryn M Gould, Christine Gemund, Toby J Gibson, Manuela Helmer-Citterich
BMC Bioinformatics 2009, 10:351 (24October2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

Research
Grammatical-Restrained Hidden Conditional Random Fields for Bioinformatics Applications
Piero Fariselli, Castrense Savojardo, Pier Luigi Martelli, Rita Casadio
Algorithms for Molecular Biology 2009, 4:13 (22October2009)
[Abstract] [Provisional PDF] [PubMed] [Related articles]

Research article
Evidence for the adaptation of protein pH-dependence to subcellular pH
Pedro Chan, Jim Warwicker
BMC Biology 2009, 7:69 (22October2009)
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Research article
Mapping of protein phosphatase-6 association with its SAPS domain regulatory subunit using a model of helical repeats
Julien Guergnon, Urszula Derewenda, Jessica R Edelson, David L Brautigan
BMC Biochemistry 2009, 10:24 (16October2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Review
Endocytosis of glycosylphosphatidylinositol-anchored proteins
Shaheen E Lakhan, Shefali Sabharanjak, Ananya De
Journal of Biomedical Science 2009, 16:93 (15October2009)
[Abstract] [Full Text] [PDF] [PubMed] [Related articles]

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