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Open Access Research article

Wavelet-based protocols for ion channel electrophysiology

Armin Kargol

Author Affiliations

Physics Department, Loyola University New Orleans, New Orleans, LA, 70118, USA

BMC Biophysics 2013, 6:3  doi:10.1186/2046-1682-6-3

Published: 14 March 2013

Additional files

Additional file 1:

A function file which accepts the model parameters of the SS model and the applied voltage as its inputs and returns the transition matrix for this model.

Format: M Size: 6KB Download file

Open Data

Additional file 2:

A function file which accepts the model parameters of the ZHA D model and the applied voltage as its inputs and returns the transition matrix for this model.

Format: M Size: 2KB Download file

Open Data

Additional file 3::

A function file that accepts two discrete time series as its arguments and returns the χ2 error between the series, normalized to the number of sampling points.

Format: M Size: 1KB Download file

Open Data

Additional file 4::

Matlab code to optimize a pulse synthesized from wavelets. The program uses the difference between the computed responses of models SS and ZHA D (computed as χ2 error) as the cost functional and optimizes the pulse for maximal value of the cost functional.

Format: M Size: 7KB Download file

Open Data