Table 1

Summary of candidate EC reference genes identified for the normalisation of miRNA expression data in MB
Gene Chromosomal location p value Fold change Coefficient of variation Candidate EC gene
Card A
RNU48 6p21.33 0.351 2.36 9.52 No
RNU44 1q25.1 0.709 1.02 6.50 Yes
MammU6 15q23 0.049 3.66 11.10 No
hsa-miR-133a 18q11.2/ 20q13.33 0.797 1.16 7.05 Yes
hsa-miR-339-5p 7p22.3 0.218 1.47 5.89 Yes
hsa-miR-214 1q24.3 0.853 1.36 8.45 Yes
hsa-miR-197 1p13.3 0.515 -1.41 5.65 Yes
hsa-miR-18a 13q31.3 0.687 1.09 9.64 Yes
hsa-miR-210 11p15.5 0.766 1.41 6.07 Yes
hsa-miR-328 16q22.1 0.564 1.46 7.40 Yes
hsa-miR-301a 17q22 0.384 1.32 7.23 Yes
hsa-miR-218 4p15.31 0.592 1.14 9.86 Yes
hsa-miR-149 2q37.3 0.647 -1.36 7.97 Yes
hsa-miR-20b Xq26.2 0.397 -1.03 9.32 Yes
Card B
RNU48 6p21.33 0.250 2.64 9.50 No
RNU44 1q25.1 0.968 1.49 6.61 Yes
MammU6 15q23 0.023 4.29 13.25 No
RNU24 9q34 0.423 1.19 4.77 Yes
RNU43 22q13 <0.01 498.00 21.50 No
RNU6B 10p13 <0.01 14.98 9.16 No
hsa-miR-425* 3q21.31 0.493 1.42 4.53 Yes
hsa-miR-877 6p21.33 0.350 1.39 3.33 Yes
hsa-miR-130b* 22q11.2 0.910 -1.13 6.39 Yes
hsa-miR-181a-2* 9q33.3 0.972 1.48 6.10 Yes

Uniformly and differentially expressed snoRNA candidate EC reference genes from both TLDA cards A and B are listed with chromosomal location.

Genovesi et al.

Genovesi et al. BMC Research Notes 2012 5:507   doi:10.1186/1756-0500-5-507

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