Additional file 5.

Essentiality annotations and ROL values for all E. coli genes. The data here show the annotations of essentiality and non-essentiality, as well as the ROL values calculated for each orf in E. coli. The data are listed in tab-delimited columns, as follows: E. coli orf name; Blattner number used by PEC, Blattner number used by Keio study; whether the gene is annotated as essential by the PEC study (1 = essential, 2 = nonessential, 4 = unknown); whether the gene is annotated as essential by the Keio study; the ROL value calculated when using all 448 bacterial taxa, the ROL when using only γ-β-proteobacteria (NA: orthologues were present in fewer than 10% of the taxa); the ROL when using only α-proteobacteria; the ROL when using only Bacilli-Mollicutes.

Format: TAB Size: 176KB Download file

Silander and Ackermann BMC Research Notes 2009 2:2   doi:10.1186/1756-0500-2-2