Table 4

Number of significant differentially methylated loci detected for given cutoff p-value based on the real data.

Method

1e-3

1e-4

1e-5

1e-6


Fisher

Z-test

Fisher

Z-test

Fisher

Z-test

Fisher

Z-test


ANOVA

981

1079

655

690

479

499

350

375

Median

906

893

464

449

255

240

143

127

Welch

1096

1106

640

673

416

424

281

289

K-W

1359

1340

823

859

551

590

381

401


Chen et al. BMC Medical Genomics 2013 6(Suppl 1):S9   doi:10.1186/1755-8794-6-S1-S9

Open Data