Additional file 1.
We have included the following additional files.Table S1. Characteristics of included studies; Table S2. ESR1 binding sites overlapping with blacklisted regions; Table S3. Genomic location of ESR1 binding sites relative to the number of shared datasets; Table S4. Frequency of ESR1 binding sites possessing at least one JASPAR ESR1 motif (MA0112.2); Table S5. ESR1 enrichment within genomic regions associated with diseases/traits (O/E = observed/expected); Table S6. ESR1 enrichment within genomic regions associated with diseases/traits for central 200 bps of each interval (O/E = observed/expected); Table S7. GWAS SNPs or those in LD (r^2 ≥ 0.8) within ESR1 binding sites; Table S8. ESR1 enrichment within DNase I hypersensitivity peaks and estradiol differentially expressed genes (n.d. = not done); Table S9. ESR1 with and without motifs or DNase I hypersensitivity peaks enrichment within genomic regions associated with diseases/traits for central 200 bps of each interval (O/E = observed/expected; DHS = DNase I hypersensitivity peaks); and Table S10. Overlap of ESR1 ChIP-seq binding sites from primary cancer samples (O/E = observed/expected).
Format: XLS Size: 245KB Download file
This file can be viewed with: Microsoft Excel Viewer
Handel et al. BMC Medical Genomics 2013 6:45 doi:10.1186/1755-8794-6-45