Table 3

Genomic Losses in Rectal Adenoma and Adenocarcinoma
Chromosome Region Rectal adenoma Rectal adenocarcinoma
Start End No. of probes No. of cases Start End No. of probes No. of cases
1p36.23-p36.22 7804415 11633739 82 3
1p36.22-p36.13 12600054 16167534 41 3
1p36.12-p35.3 21802142 29525663 226 3
1q21.2-q21.3 148163183 149505863 60 2
1q21.3-q23.1 151880217 155031244 154 2
4q12 55913547 57653302 38 2
5p15.33-p12 260981 45865412 433 2
5q13.2 68434643 68900029 18 3
7p22.2-p22.1 4298590 6547570 42 2
7q11.23 72003839 75977276 77 3
7q22.1 99538250 101895994 79 2
8q22.2-q24.3 100781187 143914353 448 2
8q24.3 143914353 146250824 75 2
9q34.11 130111425 132321365 64 2
10p14-p11.21 11825924 35645512 315 3
11p15.2-p11.12 14750051 50638829 468 2
11q13.1-q14.1 63802950 80046693 442 4
12q24.23-q24.33 116956235 132193660 257 2
14q12-q21.1 30209271 38927323 130 3
14q22.1-q24.3 48874529 77750644 544 3
14q31.3-q32.1 87763614 93260389 110 3
14q32.2-q32.32 99254905 102592287 70 3
15q15.1-q21.1 38653893 42843706 119 3
15q22.31 61519869 64628895 74 3
15q25.1-q25.2 76206143 79967204 77 3
17p13.1-p11.2 84287 21386319 606 2 8327645 20974722 266 4
17q25.1 70528777 71603516 61 3
18p11.32-p11.21 170229 13875315 173 2 2580000 13752309 137 5
18q11.1-q11.2 16904187 76018409 684 2 16976046 20313378 51 4
19p13.3-p13.11 1432408 19699544 795 4
19q13.11-q13.43 37554715 63672832 1114 2
20q13.33 60039825 62320720 85 2
22q13.1 37689058 37715431 3 2

Note: The number of rectal adenoma and adenocarcinoma in Array CGH study are both 8 cases.

Shi et al.

Shi et al. BMC Medical Genomics 2012 5:52   doi:10.1186/1755-8794-5-52

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