Table 2

Genomic Gains in Rectal Adenoma and Adenocarcinoma
Chromosome Region Rectal adenoma Rectal adenocarcinoma
Start End No. of probes No. of cases Start End No. of probes No. of cases
1q21.3 150819451 150852905 3 3
1q25.3-q31.3 183720174 197184608 157 3
1q32.1-q41 204180950 214439909 173 3
5p13.3-p12 33503866 45681293 165 3
6p21.33-p21.31 30737615 33655570 151 4
6q16.3-q27 100547312 168205989 848 2
7p21.3-p15.3 11041844 23202043 119 4 7671318 23172047 142 5
7p15.3-p14.1 23821348 39813908 231 5
7p14.1-p13 40099046 44497196 64 5
7p13-p11.2 44890654 55242365 111 5
7q21.11-q21.12 81196827 86205180 42 2
7q21.12-q21.3 87207024 97321855 144 4
7q22.3-q32.1 106191096 127234809 245 2 105253205 127519635 260 4
8q12.1 59565778 61340797 21 3
8q24.21-q24.22 128816904 133653633 42 3
9p24.1-p21.1 7058096 31463899 251 4
11p15.5 192958 2278596 76 4
11q13.2 66917525 67689856 30 4
12p13.31-p11.21 9053548 30700931 337 2
12q12-q13.11 37052371 47174877 139 2
12q13.13 50568352 51486634 34 4
12q14.1-q22 57350276 91428773 354 2

13q13.1-q14.11

13q21.1-q32.1

13q32.3-q34

21038984 109780488 909 2 32490193 39679219 79 7
52774228 94079000 275 7
100091512 114022929 148 7
19p13.2-p13.11 9800520 19631574 473 3
19q13.13-q13.33 43396893 55615310 550 3
20p11.21 7296794 23132344 189 3 22510206 23380542 15 8
20q11.23-q12 29592072 42681834 275 2 35467169 41087006 78 7
20q13.2-q13.33 52017030 62323759 215 7

Note: The number of rectal adenoma and adenocarcinoma in Array CGH study are both 8 cases.

Shi et al.

Shi et al. BMC Medical Genomics 2012 5:52   doi:10.1186/1755-8794-5-52

Open Data