Table 4

Summary of the significant results of logistic regression analyses
Gene SNP ALL B-ALL T-ALL HD-ALL*
P-value OR 95% C.I. P-value OR 95% C.I. P-value OR 95% C.I. P-value OR 95% C.I.
IKZF1 rs6964969 1.67E-05 1.50 1.25-1.80 1.17E-07 1.70 1.40-2.08 1.88E-01 0.76 0.50-1.14 8.72E-02 1.36 0.96-1.94
IKZF1 rs11978267 2.46E-05 1.50 1.24-1.79 2.97E-07 1.68 1.38-2.05 2.11E-01 0.77 0.51-1.16 5.08E-02 1.42 1.00-2.02
IKZF1 rs4132601 1.69E-05 1.50 1.25-1.80 2.22E-07 1.69 1.38-2.06 3.46E-01 0.83 0.55-1.23 9.13E-02 1.36 0.95-1.94
ARID5B rs10821936 7.31E-05 1.43 1.20-1.71 1.95E-05 1.53 1.26-1.85 3.90E-01 1.17 0.82-1.66 5.72E-03 1.61 1.15-2.27
ARID5B rs7089424 1.17E-04 1.42 1.19-1.69 2.68E-05 1.52 1.25-1.84 4.14E-01 1.16 0.81-1.65 6.70E-03 1.60 1.14-2.24
ARID5B rs4506592 1.72E-04 1.40 1.18-1.67 3.35E-05 1.51 1.24-1.83 6.70E-01 1.08 0.76-1.54 1.24E-02 1.55 1.10-2.19
STAT3 rs3816769 3.76E-02 0.83 0.69-0.98 4.23E-02 0.82 0.67-0.99 5.82E-01 0.91 0.64-1.29 1.34E-04 0.62 0.49-0.79
STAT3 rs12949918 5.15E-02 0.84 0.71-1.00 6.37E-02 0.84 0.69-1.01 5.54E-01 0.90 0.64-1.27 2.32E-04 0.64 0.50-0.81

*Hyperdiploid ALL; Tag SNPs are bold, as well as P-values, which reached the p < 3.42E-04; FDR(α)= 1% significance threshold.

Lautner-Csorba et al.

Lautner-Csorba et al. BMC Medical Genomics 2012 5:42   doi:10.1186/1755-8794-5-42

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