Table 6

Candidate genes whose transcript levels are correlated with birth weight

Data Set

L1-regularized regression

R2

Non-zero regressions/total "leave one out" regressions at maximum L1 R2

Tissue

Genes in model

Description


48 newborns, expression at 47,000 transcripts assayed using Illumina's HumanHT-12 v3 Expression BeadChip

0.55

45/48

Blood

HS.406106

BX090408 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998E08415; IMAGE:211951

LOC255130

PREDICTED: Homo sapiens hypothetical LOC255130 (LOC255130)

Placenta

HS.568324

AGENCOURT_7975600 NIH_MGC_113 Homo sapiens cDNA clone IMAGE:6215286 5

HS.572889

DA236664 BRAWH3 Homo sapiens cDNA clone BRAWH3033381 5

NBPF10

Homo sapiens neuroblastoma breakpoint family


Turan et al. BMC Medical Genomics 2012 5:10   doi:10.1186/1755-8794-5-10

Open Data