Table 3

Top 20 annotated classifier genes of RL samples.

Accession number

Gene name

Symbol

Fold change


AF126749

ATXN8 opposite strand (non-protein coding)

ATXN8OS

1.65

AL117661

TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140 kDa

TAF3

0.71

NM_006107

LUC7-like 3 (S. cerevisiae)

LUC7L3

0.68

AK025953

Myosin light chain kinase

MYLK

0.55

NM_004367

Chemokine (C-C motif) receptor 6

CCR6

0.50

X64983

Olfactory receptor, family 10, subfamily D, member 3 pseudogene

OR10D3P

0.48

AK024040

Hypothetical LOC148413

LOC148413

0.48

AF085877

Hypothetical protein LOC254100

LOC254100

0.47

NM_001290

LIM domain binding 2

LDB2

0.46

J02639

Serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5

SERPINA5

0.43

NM_002989

Chemokine (C-C motif) ligand 21

CCL21

0.42

X87888

Immunoglobulin lambda locus

IGL@

0.37

AF026932

Immunoglobulin lambda locus

IGL@

0.37

AJ270695

Basic helix-loop-helix family, member e41

BHLHE41

0.32

X87890

Immunoglobulin lambda locus

IGL@

0.31

U50342

Immunoglobulin kappa constant

IGKC

0.29

AF035799

Immunoglobulin kappa variable 3-20

IGKV3-20

0.28

AF035787

Immunoglobulin heavy variable 3-48

IGHV3-48

0.28

AF035035

Immunoglobulin kappa variable 1D-8

IGKV1D-8

0.27

X57772

Immunoglobulin lambda variable 6-57

IGLV6-57

0.25


Genes are ranked from high to low fold change (differential expression in reactive versus remainder of samples).

Loi et al. BMC Medical Genomics 2011 4:27   doi:10.1186/1755-8794-4-27

Open Data