Table 3

Comparison of QRT-PCR validation and microarray mean relative values1

Genbank

Gene Symbol

Map

Microarray

QRT-PCR

Pathway


NM_178502

DTX3

12q13.2

0.57 (0.22)

0.63 (0.30)

Notch

NM_004423

DVL3

3q27

0.38 (0.13)

0.53 (0.15)

WNT

NM_030775

WNT5B

12p13.3

0.53 (0.14)

0.15 (0.51)

WNT

NM_006172.3

NPPA

1p36.22

2.2 (0.59) (shunt) 19.4 (5.02) (no shunt)

2.1 (0.32) (shunt) 19.3 (0.82) (no shunt)

BMP


1. Expression level (fold change) relative to the normalized control values set at 1, mean (+/- sd).

Bittel et al. BMC Medical Genomics 2011 4:1   doi:10.1186/1755-8794-4-1

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