Table 2

Summary of Gene Regulation

Comparison

#Over-Represented

#Under-Represented

#Normally-Represented


TP1 vs Control

11

4

40985

TP2 vs Control

22

51

40937

TP3 vs Control

65

210

40725


All genes are grouped by the type of regulation for all comparisons. To filter differentially expressed genes we used the following thresholds: fdr <5% and fold change greater 2 or less than 1/2.

Opitz et al. BMC Medical Genomics 2010 3:36   doi:10.1186/1755-8794-3-36

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