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Resolution: standard / high Figure 1.
Peripheral blood-derived eEPC and OECs have distinctive transcriptomes. Normalised data from Illumina WG-6 v3.0 Expression Beadchip were imported into NIA
array for analysis. Numbers of upregulated transcripts are shown in red and downregulated
transcripts in green. There were minimal differences (<50 transcripts) among technical
replicates as shown by the log-ratio chart for pairwise comparison of eEPC replicates(A),
and the log-ratio chart for pairwise comparison of OEC replicates(B); however there
were extensive differences (> 5000 differentially expressed transcripts) when eEPCs
were compared to OECs as shown by the log-ratio chart for pairwise comparison of eEPCs
vs. OECs(C). Prinicipal component analysis (PCA) segregates eEPCs from OECs(D) using
one single component (PC1). Biplot analysis on PCA graph identifies transcripts specifically
expressed in each EPC subtype(E).
Medina et al. BMC Medical Genomics 2010 3:18 doi:10.1186/1755-8794-3-18 |