Research article
Gene expression profile analysis of human hepatocellular carcinoma using SAGE and LongSAGE
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* Corresponding authors: Guoping Zhao gpzhao@sibs.ac.cn - Weirong Jin weirong_jin@shbiochip.com
- † Equal contributors
1 Department of Microbiology and Microbial Engineering, School of Life Sciences, Fudan University, Shanghai 200433, PR China
2 International Cooperation Laboratory on Signal Transduction, Eastern Hepatobiliary Surgery Institute, Second Military Medical University, Shanghai 200438, PR China
3 Department of Mathematics and Statistics, South Dakota State University, Brookings, SD 57006, USA
4 National Engineering Center for Biochip at Shanghai, Shanghai 201203, PR China
5 Chinese National Human Genome Center at Shanghai, 351 Guo Shou-Jing Road, Shanghai 201203, PR China
6 Center for Clinical Pharmacology, Third Xiangya Hospital, Central South University, Changsha 410013, PR China
7 Department of Hepatobiliary Surgery, General Hospital of Air Force PLA, Beijing 100036, PR China
BMC Medical Genomics 2009, 2:5 doi:10.1186/1755-8794-2-5
Published: 26 January 2009Additional files
Additional file 1:
List of genes differentially expressed in HCC vs normal liver. 224 genes were identified to be differentially expressed in HCC vs normal liver, with the significance p < 0.05 and fold change > 3.
Format: XLS Size: 67KB Download file
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Additional file 2:
Functional classification of genes up-regulated in HCC. 104 genes up-regulated in HCC were grouped into eight functional clusters and one unclassified cluster.
Format: XLS Size: 38KB Download file
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Additional file 3:
Functional classification of genes down-regulated in HCC. 120 genes down-regulated in HCC were assembled into seven functional clusters and one unclassified cluster.
Format: XLS Size: 39KB Download file
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