Research article
Candidate pathways and genes for prostate cancer: a meta-analysis of gene expression data
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* Corresponding author: Ivan P Gorlov ipgorlov@mdanderson.org
1 Department of Genitourinary Medical Oncology, The University of Texas M. D. Anderson Cancer Center, Houston, TX, USA
2 Department of Epidemiology, The University of Texas M. D. Anderson Cancer Center, Houston, TX, USA
BMC Medical Genomics 2009, 2:48 doi:10.1186/1755-8794-2-48
Published: 4 August 2009Additional files
Additional file 1:
Description of datasets used for the meta-analysis. The data provided represent a brief description of the used datasets.
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Additional file 2:
Description of how many genes to use for an assessment of functional clustering. Text representing discussion of many genes to use for an assessment of functional clustering.
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Additional file 3:
List of the top 500 genes differentially expressed between normal prostate and localized prostate tumor – NP-nMPC transition. The data provided represent the list of the top 500 genes differentially expressed between normal prostate and localized prostate tumor.
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Additional file 4:
Schematics of cell adhesion pathway (according to the Kyoto Encyclopedia of Genes and Genomes). Picture representing cell adhesion pathway.
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Additional file 5:
List of genes for Table 2 "Canonical pathways significant in the transition from normal prostate to localized prostate cancer (functional annotation by Ingenuity software)". The data provided represent the list of genes for Table 2.
Format: DOC Size: 39KB Download file
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Additional file 6:
List of the top 500 differentially expressed genes in the transition from localized to metastatic prostate cancer – nMPC-MPC transition. The data provided represent the list of the top 500 differentially expressed genes in the transition from localized to metastatic prostate cancer.
Format: DOC Size: 531KB Download file
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Additional file 7:
List of genes for Table 3 "Canonical significance in nonmetastatic prostate cancer to metastatic prostate cancer (nMPC-MPC) transition pathways identified by Ingenuity software". The data provided represent the list of genes for Table 3.
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Additional file 8:
List of genes for Table 4 "Canonical pathways identified in the combined analysis of genes differentially expressed between the transitions from normal prostate to primary nonmetastatic prostate cancer (NP-nMPC) and primary nonmetatatic to metastatic prostate cancer (nMPC-MPC)". The data provided represent the list of genes for Table 4.
Format: DOC Size: 34KB Download file
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Additional file 9:
Changes in gene expression of different cell adhesion molecule in NP-nMPC transition. The data provided represent changes in gene expression of different cell adhesion molecule in NP-nMPC transition.
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Additional file 10:
Changes in expression of Integrin ligands in the transition from normal prostate to localized nonmetastatic prostate cancer – NP-nMPC transition. The data provided represent changes in expression of Integrin ligands in the transition from normal prostate to localized nonmetastatic prostate cancer.
Format: DOC Size: 83KB Download file
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