Table 3

Summary of test set composition for different evaluation scenarios

Scenarios

Ethnic population

Samples

from Platform

to Platform


Scenario 1

Western European

Lung cancer

from Affymetrix 500k

to Affymetrix SNP 6.0


Scenario 2

Western European

Lung cancer

from Affymetrix 500k

to Affymetrix SNP 6.0


Scenario 3

Western European

Lung cancer

from Affymetrix 500k

to Affymetrix SNP 6.0


Scenario 4

East Asian

Oral cancer

from Affymetrix 500k

to Affymetrix SNP 6.0


High-lighted fields are the settings that are different from the training set used in the corresponding scenarios.

Huang et al. BMC Proceedings 2012 6(Suppl 7):S3   doi:10.1186/1753-6561-6-S7-S3

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