Table 3 |
|||||
|
Comparison of True Breeding Values estimations |
|||||
|
First author |
Label |
r |
rank |
bias |
MSE |
|
|
|||||
|
Shariati |
BayesS_1 |
0.84 |
0.48 |
0.33 |
12.92 |
|
|
|||||
|
BayesS_2 |
0.84 |
0.47 |
0.33 |
12.94 |
|
|
|
|||||
|
BayesS_3 |
0.83 |
0.49 |
0.33 |
13.37 |
|
|
|
|||||
|
BayesS_4 |
0.82 |
0.49 |
0.32 |
13.62 |
|
|
|
|||||
|
Ogutu |
RR |
0.83 |
0.52 |
0.45 |
5.55 |
|
|
|||||
|
GBLUP_O |
0.81 |
0.51 |
0.39 |
8.23 |
|
|
|
|||||
|
LASSO_O |
0.87 |
0.55 |
0.43 |
6.44 |
|
|
|
|||||
|
LASSO_ad |
0.88 |
0.60 |
0.37 |
9.94 |
|
|
|
|||||
|
EN |
0.87 |
0.52 |
0.44 |
5.86 |
|
|
|
|||||
|
EN_ad |
0.81 |
0.48 |
0.33 |
12.01 |
|
|
|
|||||
|
Wang |
BayesA_W |
0.86 |
0.61 |
0.38 |
9.07 |
|
|
|||||
|
BayesB_W |
0.89 |
0.66 |
0.38 |
9.12 |
|
|
|
|||||
|
BayesCπ_W |
0.88 |
0.65 |
0.39 |
9.00 |
|
|
|
|||||
|
TABLUP |
0.88 |
0.64 |
0.36 |
10.88 |
|
|
|
|||||
|
GBLUP_W |
0.77 |
0.48 |
0.46 |
4.98 |
|
|
|
|||||
|
Mucha |
AM |
0.59 |
0.37 |
0.40 |
5.93 |
|
|
|||||
|
FM |
0.47 |
0.44 |
0.13 |
43.01 |
|
|
|
|||||
|
RM1 |
0.70 |
0.34 |
0.68 |
2.54 |
|
|
|
|||||
|
RM2 |
0.70 |
0.34 |
0.65 |
2.68 |
|
|
|
|||||
|
Zeng |
GBLUPa_Z |
0.82 |
0.50 |
0.40 |
7.61 |
|
|
|||||
|
GBLUPd_Z |
0.81 |
0.49 |
0.40 |
7.59 |
|
|
|
|||||
|
BayesB _W |
0.89 |
0.66 |
0.38 |
9.22 |
|
|
|
|||||
|
BayesCπ_W |
0.89 |
0.66 |
0.39 |
8.84 |
|
|
|
|||||
|
Usai |
LASSO_Uc |
0.86 |
0.53 |
0.45 |
5.66 |
|
|
|||||
|
LASSO_Uc1 |
0.86 |
0.62 |
0.37 |
9.54 |
|
|
|
|||||
|
LASSO_Uc2 |
0.87 |
0.55 |
0.43 |
6.48 |
|
|
|
|||||
|
Schurink |
BayesZ |
0.87 |
0.63 |
0.39 |
5.20 |
|
|
|||||
|
(r=Pearson correlation between TBV and GEBV, rank=rank correlation of the best 10% TBV, bias = regression coefficient between TBV and GEBV, MSE= mean squared error of prediction of TBV by GEBV) |
|||||
|
Le Roy et al. BMC Proceedings 2012 6(Suppl 2):S3 doi:10.1186/1753-6561-6-S2-S3 |
|||||
