Table 4

Comparison of true and estimated location of all simulated QTL and their significance.

latent

variance

true

Estimated

significance

variable

of QTL

location

location

difference

pwBF

P(2ndMix)

FDR

ASYM

0.586

0.4245

all_0.4447

0.0225*

231.000

1.000

0.000

0.141

1.0455

all_1.0359

0.0096*

231.000

1.000

0.000

all_1.0516

0.0061

231.000

1.000

0.000

0.074

1.8864

all_1.8834

0.0030*

103.727

0.978

0.006

0.066

3.6979

all_3.7168

0.0189*

24.182

0.912

0.022

0.051

4.7719

all_4.8695

0.0976

0.737

0.240

0.145

0.082

2.8984

all_2.8962

0.0022

0.721

0.236

0.233

XMID

0.644

0.5425

all_0.4153

0.1272*

231.000

0.994

0.006

all_0.5309

0.0116

0.033

0.014

0.738

all_0.5365

0.0060

0.019

0.008

0.823

all_0.5381

0.0044

0.014

0.006

0.847

all 0.6062

0.0637

0.009

0.004

0.880

all_0.8210

0.2785

0.043

0.018

0.656

0.064

3.3652

all_3.4010

0.0358

0.048

0.020

0.493

all_3.3746

0.0094

0.019

0.008

0.789

0.075

4.5971

all_4.7248

0.1277

0.014

0.006

0.866

0.070

1.3302

all_1.5364

0.2062

0.009

0.004

0.892

0.070

2.0686

all_2.1531

0.0845

0.009

0.004

0.952

0.077

2.5609

all_2.5961

0.0352

0.009

0.004

0.960

SCAL

0.096

1.4889

all_1.4852

0.0037*

231.000

0.998

0.002

0.467

0.8765

all_0.9137

0.0372*

231.000

1.000

0.001

0.119

3.0962

all_3.0827

0.0135*

71.506

0.968

0.011

all_3.0411

0.0551

67.111

0.966

0.017

0.131

3.8639

all_3.8701

0.0062*

48.391

0.954

0.023

0.094

2.2622

all_2.3108

0.0486

6.121

0.724

0.065

0.092

4.3148

all_4.3212

0.0064

3.308

0.586

0.115


* indicates estimated significant QTL (FDR < 0.05)

Heuven and Janss BMC Proceedings 2010 4(Suppl 1):S12   doi:10.1186/1753-6561-4-S1-S12

Open Data