Single QTL detection with the LD and LA models for P530 (P<0.0001). Each SNP p- value is plotted based on its physical location. The linkage groups are separated by red lines. For LD1 and LD2, the overall model effect is used while the sire effect is used for LD3 and LA models. The threshold line corresponds to the natural logarithm of 0.0001 and is common to all models.
Demeure et al. BMC Proceedings 2010 4(Suppl 1):S10 doi:10.1186/1753-6561-4-S1-S10