Table 2

p-Values at SNP rs2476601 from three GWA analyses and their rankings in non-HLA SNPs

Analysis method

p-Value

Rank in non-HLA SNPs


Trend test without adjustment

5.42 × 10-12

3

Logistic regression adjusted for principal components

0.000018

18

Logistic regression adjusted for MDS dimensions

0.000022

59


Wang et al. BMC Proceedings 2009 3(Suppl 7):S109  

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