Table 3

Hypothetical proteins whose functions can be easily inferred from their partners

HIP (protein ID)

Complex No.

CQI

Name

Confirmed later


HIP000013164

24

10.1.2/13

dREAM complex

yes

HIP000053526

24

10.1.2/13

dREAM complex

yes

HIP000177716

61

8.0.1/9

Fanconi anemia (FA) core complex

yes

HIP000079962

75

11.0.2/13

INO80 complex

yes

HIP000024165

101

4.0.1/5

Lamins complex

no

HIP000046613

200

3.0.2/5

C8orf32-EFCBP2-RUNX1T1-ZNF652 containing complex

no

HIP000038372

673

4.0.1/5

BCL2A1-BCL2L1-BCL2L2-HRK-PMAIP1 complex

no

HIP000089800

922

2.0.1/3

HIF-1alpha-pVHL-ElonginB-ElonginC complex

no

HIP000027799

940

3.0.1/4

SRGAP3-WASF1 containing complex

no

HIP000060581

960

3.0.2/5

C19orf25-KNTC1-ZW10 containing complex

no

HIP000015491

967

3.0.2/5

NONO-PSPC1-WBP4-ZNRD1 containing complex

no

HIP000114159

1156

2.0.2/4

NUTF2-RAN complex

no

HIP000091971

1310

4.0.3/7

SCF (Skp1, cullin 1, F-box) ubiquitin E3 ligase complex

no


Thirteen hypothetical proteins whose complexes have at least half category I subunits are shown.

Kikugawa et al. BMC Systems Biology 2012 6(Suppl 2):S7   doi:10.1186/1752-0509-6-S2-S7

Open Data