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This article is part of the supplement: Proceedings of the 23rd International Conference on Genome Informatics (GIW 2012)

Open Access Proceedings

Two combinatorial optimization problems for SNP discovery using base-specific cleavage and mass spectrometry

Xin Chen1*, Qiong Wu12, Ruimin Sun1 and Louxin Zhang3

Author Affiliations

1 School of Physical and Mathematical Sciences, Nanyang Technological University, Singapore

2 The Key Laboratory of Embedded System and Service Computing, Ministry of Education; Tongji University, Shanghai 200092, China

3 Department of Mathematics, National University of Singapore, Singapore

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BMC Systems Biology 2012, 6(Suppl 2):S5  doi:10.1186/1752-0509-6-S2-S5

Published: 12 December 2012

Additional files

Additional file 1:

Extensions to edit distance. The analysis results for the problems <a onClick="popup('http://www.biomedcentral.com/1752-0509/6/S2/S5/mathml/M160','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1752-0509/6/S2/S5/mathml/M160">View MathML</a> and <a onClick="popup('http://www.biomedcentral.com/1752-0509/6/S2/S5/mathml/M161','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1752-0509/6/S2/S5/mathml/M161">View MathML</a> are presented. See "Additional file 1.pdf".

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