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Open Access Research article

Simultaneous learning of instantaneous and time-delayed genetic interactions using novel information theoretic scoring technique

Nizamul Morshed*, Madhu Chetty and Nguyen Xuan Vinh

Author Affiliations

Gippsland School of Information Technology, Faculty of Information Technology, Monash University, VIC 3842, Northways Road, Australia

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BMC Systems Biology 2012, 6:62  doi:10.1186/1752-0509-6-62

Published: 12 June 2012

Additional files

Additional file 1:

Comparison of performance with 3 other methods for the 10, 25 and 50-gene differential equation based synthetic network.

Format: PDF Size: 43KB Download file

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Open Data

Additional file 2:

Reconstruction of SOS DNA Repair Network in E. coli-Experiment 2, 3, 4; results obtained using BANJO.

Format: PDF Size: 23KB Download file

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Open Data

Additional file 3:

Reconstruction of SOS DNA Repair Network in E. coli-Experiment 2, 3, 4; results obtained using BNFinder+BDe.

Format: PDF Size: 23KB Download file

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Open Data

Additional file 4:

Reconstruction of SOS DNA Repair Network in E. coli-Experiment 2, 3, 4; results obtained using BNFinder+MDL.

Format: PDF Size: 22KB Download file

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Open Data

Additional file 5:

Reconstruction of SOS DNA Repair Network in E. coli-Experiment 2, 3, 4; results obtained using the proposed approach.

Format: PDF Size: 22KB Download file

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Open Data

Additional file 6:

Reconstruction of SOS DNA Repair Network in E. coli-Experiment 2, 3, 4; results obtained using TDARACNE.

Format: PDF Size: 22KB Download file

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Open Data

Additional file 7:

The compiled gene ontology annotation database used for the functional enrichment analysis.

Format: TXT Size: 654KB Download file

Open Data