Table 1

Model genes

ID

Name

Cluster

Function


AFUA 5G11260

SreA

1

siderophore transcription factor SreA

AFUA 5G03920

HapX

3

bZIP transcription factor (HapX), putative

AFUA 3G11970

PacC

3

C2H2 transcription factor PacC, putative

AFUA 2G01260

SrbA

1

HLH transcription factor, putative

AFUA 5G06270

HemA

1

5-aminolevulinic acid synthase

AFUA 5G10370

Sdh2

1

succinate dehydrogenase iron-sulphur protein

AFUA 4G14640

Fet4

2

low-affinity iron transporter, putative

AFUA 5G10610

AFUA 5G10610

2

ubiquinol-cytochrome c reductase iron-sulfur subunit precursor

AFUA 3G03640

MirB

3

siderochrome-iron transporter (MirB), putative

AFUA 5G03800

FtrA

3

high-affinity iron permease CaFTR2

AFUA 1G04450

SidL

4

siderophore biosynthesis protein, putative

AFUA 1G07480

Hem13

4

coproporphyrinogen III oxidase, putative


Genes used as candidates for the regulatory network model.

Linde et al. BMC Systems Biology 2012 6:6   doi:10.1186/1752-0509-6-6

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