pice: discovery of phenotype-determining component interplays
1 Department of Computer Science, North Carolina State University, Raleigh, NC 27695, USA
2 Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
3 Department of Civil and Environmental Engineering, University of South Florida, Tampa, FL 33620, USA
4 Trinity College of Arts and Sciences, Duke University, Durham, NC 27708, USA
5 Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
BMC Systems Biology 2012, 6:40 doi:10.1186/1752-0509-6-40Published: 14 May 2012
Additional file 1:
17H 2-producing and 11 H2-non-producing microorganisms.
Format: XLS Size: 320KB Download file
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Additional file 2:
Enzymes associated with biohydrogen production detected by SPICE.
Format: XLSX Size: 17KB Download file
Additional file 3:
COG data with 17 microorganisms for biohydrogen production.
Format: XLSX Size: 269KB Download file
Additional file 4:
COG modules related to biohydrogen production detected by SPICE.
Format: XLSX Size: 18KB Download file
Additional file 5:
COG data with 141 microorganisms for motility phenotype.
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Additional file 6:
COG modules related to motility detected by SPICE.
Format: XLSX Size: 44KB Download file
Additional file 7:
Cancer-related gene modules detected on Leukemia data.
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Additional file 8:
Pseudo-code of SPICE algorithm.
Format: ZIP Size: 18KB Download file