Open Access Methodology article

In silico labeling reveals the time-dependent label half-life and transit-time in dynamical systems

Thomas Maiwald12*, Julie Blumberg34, Andreas Raue1, Stefan Hengl1, Marcel Schilling5, Sherwin KB Sy6, Verena Becker257, Ursula Klingmüller57 and Jens Timmer11089

Author Affiliations

1 Center for Systems Biology, Freiburg, Germany

2 Department of Systems Biology, Harvard Medical School, Boston, USA

3 Epilepsy Center, University Hospital Freiburg, Germany

4 Department of Neuroscience, Children's Hospital, Harvard Medical School, Boston, USA

5 Division Systems Biology of Signal Transduction, DKFZ-ZMBH Alliance, German Cancer Research Center, Heidelberg, Germany

6 College of Pharmacy, University of Florida, Gainesville, USA

7 Bioquant, Heidelberg University, Germany

8 Freiburg Institute for Advanced Studies, University of Freiburg, Germany

9 BIOSS Centre for Biological Signalling Studies, University of Freiburg, Germany

10 Department of Clinical and Experimental Medicine, Linköping University, Sweden

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BMC Systems Biology 2012, 6:13  doi:10.1186/1752-0509-6-13

Published: 27 February 2012

Additional files

Additional file 1:

Application within PottersWheel. This additional file contains MATLAB scripts to run various tasks related to the in silico labeling approach. http://www.biomedcentral.com/imedia/4654854926777309/supp1.pdf. webcite.

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