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Open Access Highly Accessed Research article

Emergence of bimodal cell population responses from the interplay between analog single-cell signaling and protein expression noise

Marc R Birtwistle1234, Jens Rauch2, Anatoly Kiyatkin3, Edita Aksamitiene3, Maciej Dobrzyński2, Jan B Hoek3, Walter Kolch2, Babatunde A Ogunnaike4* and Boris N Kholodenko23*

Author affiliations

1 Dept. of Pharmacology and Systems Therapeutics, Mount Sinai School of Medicine, New York, NY, 10029, USA

2 Systems Biology Ireland, University College Dublin, Belfield, Dublin 4, Ireland

3 Dept. of Anatomy, Pathology, and Cell Biology, Thomas Jefferson University, Philadelphia, PA, 19107, USA

4 Dept. of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE, 19716, USA

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Citation and License

BMC Systems Biology 2012, 6:109  doi:10.1186/1752-0509-6-109

Published: 24 August 2012

Abstract

Background

Cell-to-cell variability in protein expression can be large, and its propagation through signaling networks affects biological outcomes. Here, we apply deterministic and probabilistic models and biochemical measurements to study how network topologies and cell-to-cell protein abundance variations interact to shape signaling responses.

Results

We observe bimodal distributions of extracellular signal-regulated kinase (ERK) responses to epidermal growth factor (EGF) stimulation, which are generally thought to indicate bistable or ultrasensitive signaling behavior in single cells. Surprisingly, we find that a simple MAPK/ERK-cascade model with negative feedback that displays graded, analog ERK responses at a single cell level can explain the experimentally observed bimodality at the cell population level. Model analysis suggests that a conversion of graded input–output responses in single cells to digital responses at the population level is caused by a broad distribution of ERK pathway activation thresholds brought about by cell-to-cell variability in protein expression.

Conclusions

Our results show that bimodal signaling response distributions do not necessarily imply digital (ultrasensitive or bistable) single cell signaling, and the interplay between protein expression noise and network topologies can bring about digital population responses from analog single cell dose responses. Thus, cells can retain the benefits of robustness arising from negative feedback, while simultaneously generating population-level on/off responses that are thought to be critical for regulating cell fate decisions.