Table 3

Numbers of DEGs of low expression obtained by various methods.

Cutoff

LRT

Cond

Wald

Wald-Log

VST

Fisher


1e-3

498

434

462

581

498

434

1e-4

303

258

270

403

305

260

1e-5

195

166

166

275

201

166

1e-6

113

86

84

209

119

86


Numbers of DEGs selected from the 2657 low expression genes with different cutoff p-values by each method.

Chen et al. BMC Systems Biology 2011 5(Suppl 3):S1   doi:10.1186/1752-0509-5-S3-S1

Open Data