Figure 2.

Final model and 10 motif combinations

(a) p-value and deviance The lower left diagonal of the table (left triangle) shows deviances, and the right upper (right triangle) shows p-values in the Table of the final model. (b) An independent graph When the final model was selected (p-value < 0.001), the independent graph indicates several directional interactions of motif candidates. (c) Motif combinations Ten motif combinations were selected. (d) Motifs in the independent graph Position of motifs in the independent graph were arranged to provide an intuitive display. The graph shows that MYOD, GATA-1 and MZF1 interact directly with MafB motifs, as AP4/AML(10ATCT) and Nkx-2.5 motifs.

Morita et al. BMC Systems Biology 2011 5(Suppl 2):S7   doi:10.1186/1752-0509-5-S2-S7